📗 -> Bioinformatics
short mode
not done
tags include #class
description includes BINF🔗 Critical Links
- Put important links for class
🔶 Course Description
Registrar
Fundamental biological, mathematical and algorithmic models underlying bioinformatics and systems biology; sequence analysis, database search, genome annotation, clustering and classification, functional gene networks, regulatory network inference, phylogenetic trees, applications of common bioinformatics tools in molecular biology and genetics.
Goals:
- understand the role and utility of bioinformatics in modern biology
- learn basic biological, mathematical, and algorithmic concepts
- master common bioinformatics tools
- do simple programming in Perl or Java to extend the utility of common bioinformatics tool
❗ Important
Instructor:
- Yelena Frid
TA:
- Pranav Gupta
📄 Class Material
Week 1 - Intro to Bioinformatics
- Introduction and course overview - ECS124-L1
- ECS124-D1 - nothing
- Sequences, mutation, notation - ECS124-L2
Week 2 - Alignment
Week 3 -
Week 4 -
- ECS124-L7
- ECS124-D4
ECS124-Prep1 - Midterm 1
Week 5
- ECS124-L8
- Did not pay attention in discussion, he went over Perl (file operations for sure, probably more)
- ECS124-L9
Week 6
Week 7
- l11
- l12
Week 8
- ECS124-L13
ECS124-Prep2 - Midterm 2
Week 9
Week 10
- ECS124-L16
- Extra Credit Assessment
Final Review:
ECS124-Final-Prep